Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion protein | AO275_07355 | Not Available | Positive | 5165397 - 5166212 | 29296.2 |
| translocation protein in type iii secretion system, rhcu | AO275_07360 | Not Available | Positive | 5166212 - 5167258 | 38105.4 |
| transcriptional regulator | AO275_07365 | Not Available | Negative | 5167272 - 5170091 | 104602.0 |
| malate:quinone oxidoreductase | AO275_07370 | Not Available | Negative | 5170617 - 5172260 | 59939.7 |
| xanthine dehydrogenase | AO275_07375 | Not Available | Positive | 5173243 - 5173923 | 23604.1 |
| xanthine dehydrogenase | AO275_07380 | Not Available | Positive | 5173923 - 5174906 | 34912.1 |
| aldehyde oxidase | AO275_07385 | Not Available | Positive | 5174916 - 5177132 | 80027.9 |
| xanthine dehydrogenase | AO275_07390 | Not Available | Positive | 5177135 - 5178103 | 33939.3 |
| molybdopterin-guanine dinucleotide biosynthesis protein moba | AO275_07395 | Not Available | Negative | 5178084 - 5178707 | 22231.0 |
| flavin reductase | AO275_07400 | Not Available | Positive | 5178853 - 5179437 | 21593.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
