Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_07305 | Not Available | Positive | 5158883 - 5159101 | 7724.62 |
| hypothetical protein | AO275_07310 | Not Available | Positive | 5159111 - 5159542 | 14718.3 |
| type iii secretion protein | AO275_07315 | Not Available | Positive | 5159546 - 5160325 | 27921.2 |
| type iii secretion protein | AO275_07320 | Not Available | Positive | 5160322 - 5160951 | 23165.8 |
| type iii secretion protein | AO275_07325 | Not Available | Positive | 5160944 - 5161540 | 22014.7 |
| atp synthase | AO275_07330 | Not Available | Positive | 5161533 - 5162861 | 47258.0 |
| hypothetical protein | AO275_07335 | Not Available | Positive | 5162911 - 5163423 | 19486.5 |
| type iii secretion protein | AO275_07340 | Not Available | Positive | 5163420 - 5164463 | 37809.4 |
| type iii secretion system protein ssar | AO275_07345 | Not Available | Positive | 5164460 - 5165116 | 24020.0 |
| type iii secretion protein | AO275_07350 | Not Available | Positive | 5165121 - 5165390 | 9379.94 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
