Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | AO275_17375 | Not Available | Negative | 404392 - 405018 | 23628.3 |
| ornithine acetyltransferase | AO275_17380 | Not Available | Negative | 405070 - 406287 | 42420.7 |
| preprotein translocase subunit seca | AO275_17385 | Not Available | Negative | 406399 - 409137 | 103371.0 |
| rna-binding protein | AO275_17390 | Not Available | Positive | 409443 - 409898 | 17070.7 |
| histidine kinase | AO275_17395 | Not Available | Negative | 409915 - 411528 | 59412.8 |
| udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase | AO275_17400 | Not Available | Negative | 411766 - 412677 | 33156.7 |
| cell division protein ftsz | AO275_17405 | Not Available | Negative | 412790 - 413977 | 41537.1 |
| cell division protein ftsa | AO275_17410 | Not Available | Negative | 414062 - 415318 | 44532.7 |
| cell division protein ftsq | AO275_17415 | Not Available | Negative | 415333 - 416196 | 32616.7 |
| d-alanine--d-alanine ligase | AO275_17420 | Not Available | Negative | 416200 - 417159 | 34193.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
