Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase | AO275_07255 | Not Available | Positive | 5146928 - 5147353 | 16081.0 |
| hypothetical protein | AO275_07260 | Not Available | Negative | 5147414 - 5150893 | 123943.0 |
| smad/fha domain protein | AO275_07265 | Not Available | Positive | 5151765 - 5152730 | 34236.2 |
| hypothetical protein | AO275_07270 | Not Available | Positive | 5152727 - 5153086 | 13443.2 |
| type iii secretion protein | AO275_07275 | Not Available | Positive | 5153083 - 5153421 | 12436.0 |
| type iii secretion protein | AO275_07280 | Not Available | Positive | 5153418 - 5155562 | 77967.4 |
| type ii and iii secretion system protein rhcc2 | AO275_07285 | Not Available | Positive | 5155559 - 5156875 | 45910.9 |
| hypothetical protein | AO275_07290 | Not Available | Positive | 5156888 - 5157304 | 14971.8 |
| hypothetical protein | AO275_07295 | Not Available | Negative | 5157307 - 5158089 | 28170.7 |
| type iii secretion protein | AO275_07300 | Not Available | Positive | 5158253 - 5158864 | 22477.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
