Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter substrate-binding protein | AO275_07195 | Not Available | Positive | 5135450 - 5136463 | 36200.4 |
| l-arabinose transporter atp-binding protein | AO275_07200 | Not Available | Positive | 5136516 - 5138039 | 55274.4 |
| arabinose abc transporter permease | AO275_07205 | Not Available | Positive | 5138081 - 5139046 | 34005.8 |
| amino acid permease | AO275_07215 | Not Available | Negative | 5140403 - 5141719 | 45541.2 |
| hypothetical protein | AO275_07220 | Not Available | Positive | 5142282 - 5142827 | 19886.9 |
| hypothetical protein | AO275_07225 | Not Available | Positive | 5142884 - 5143126 | 9112.82 |
| hypothetical protein | AO275_07230 | Not Available | Positive | 5143258 - 5144118 | 30981.1 |
| dna methylase | AO275_07235 | Not Available | Positive | 5144413 - 5144844 | 16364.7 |
| hypothetical protein | AO275_07240 | Not Available | Positive | 5144841 - 5145563 | 27134.3 |
| hypothetical protein | AO275_07245 | Not Available | Negative | 5145585 - 5145827 | 8978.11 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
