Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenazine biosynthesis protein phzf | AO275_07145 | Not Available | Positive | 5125900 - 5126742 | 30040.8 |
| hypothetical protein | AO275_07150 | Not Available | Negative | 5126839 - 5127678 | 32503.6 |
| biotin synthase | AO275_07155 | Not Available | Negative | 5127675 - 5128895 | 45310.3 |
| abc transporter | AO275_07160 | Not Available | Positive | 5129190 - 5129957 | 27806.4 |
| zinc abc transporter permease | AO275_07165 | Not Available | Positive | 5129954 - 5130823 | 30171.5 |
| metal abc transporter substrate-binding protein | AO275_07170 | Not Available | Positive | 5130835 - 5131731 | 32193.3 |
| hypothetical protein | AO275_07175 | Not Available | Negative | 5131725 - 5132111 | 14311.7 |
| aldose epimerase | AO275_07180 | Not Available | Negative | 5132223 - 5133371 | 41622.1 |
| gntr family transcriptional regulator | AO275_07185 | Not Available | Positive | 5133593 - 5134312 | 26173.7 |
| gluconolaconase | AO275_07190 | Not Available | Positive | 5134393 - 5135265 | 31537.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
