Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| indolepyruvate ferredoxin oxidoreductase | AO275_07095 | Not Available | Positive | 5109225 - 5112707 | 127996.0 |
| chemotaxis protein | AO275_07100 | Not Available | Positive | 5113025 - 5114929 | 68439.5 |
| lysr family transcriptional regulator | AO275_07105 | Not Available | Negative | 5114995 - 5115900 | 33507.5 |
| acetylornithine aminotransferase | AO275_07110 | Not Available | Positive | 5116005 - 5117207 | 43161.5 |
| tyrosyl-trna synthetase | AO275_07115 | Not Available | Positive | 5117330 - 5117878 | 19145.3 |
| histidine kinase | AO275_07120 | Not Available | Negative | 5118099 - 5118539 | 15970.7 |
| diguanylate cyclase | AO275_07125 | Not Available | Negative | 5118660 - 5121242 | 96586.6 |
| dna polymerase ii | AO275_07130 | Not Available | Positive | 5121484 - 5123847 | 89717.2 |
| arsenic resistance protein | AO275_07135 | Not Available | Positive | 5123907 - 5124887 | 34823.2 |
| nad-dependent deacetylase | AO275_07140 | Not Available | Negative | 5124892 - 5125740 | 30839.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
