Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa acetyltransferase | AO275_07045 | Not Available | Positive | 5097869 - 5099086 | 42441.4 |
| enoyl-coa hydratase | AO275_07050 | Not Available | Positive | 5099181 - 5099954 | 27859.8 |
| hypothetical protein | AO275_07055 | Not Available | Negative | 5099941 - 5101899 | 73448.8 |
| transcriptional regulator | AO275_07060 | Not Available | Positive | 5102228 - 5102932 | 25330.0 |
| protein kinase | AO275_07065 | Not Available | Negative | 5102954 - 5104258 | 47720.3 |
| tetr family transcriptional regulator | AO275_07070 | Not Available | Negative | 5104336 - 5104881 | 20011.9 |
| mfs transporter | AO275_07075 | Not Available | Positive | 5104987 - 5106210 | 42545.3 |
| hypothetical protein | AO275_07080 | Not Available | Negative | 5106318 - 5107454 | 42519.7 |
| rna polymerase subunit sigma-70 | AO275_07085 | Not Available | Negative | 5107543 - 5108085 | 20559.9 |
| asnc family transcriptional regulator | AO275_07090 | Not Available | Negative | 5108571 - 5109038 | 17669.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
