Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_06995 | Not Available | Negative | 5090566 - 5091186 | 22455.1 |
| mammalian cell entry protein | AO275_07000 | Not Available | Negative | 5091183 - 5092859 | 60648.1 |
| paraquat-inducible protein a | AO275_07005 | Not Available | Negative | 5092852 - 5093466 | 23177.7 |
| paraquat-inducible protein a | AO275_07010 | Not Available | Negative | 5093463 - 5094092 | 22933.2 |
| hypothetical protein | AO275_07015 | Not Available | Negative | 5094337 - 5094636 | 10986.9 |
| peptidase m4 | AO275_07020 | Not Available | Negative | 5094656 - 5095723 | 38572.4 |
| hypothetical protein | AO275_07025 | Not Available | Positive | 5095993 - 5096343 | 12752.3 |
| hypothetical protein | AO275_07030 | Not Available | Negative | 5096416 - 5096733 | 11165.3 |
| hypothetical protein | AO275_07035 | Not Available | Positive | 5096887 - 5097141 | 9624.55 |
| hypothetical protein | AO275_07040 | Not Available | Negative | 5097185 - 5097664 | 16894.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
