Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l32 | AO275_12770 | Not Available | Positive | 5028167 - 5028349 | 6756.95 |
| phosphate acyltransferase | AO275_12775 | Not Available | Positive | 5028354 - 5029376 | 35642.5 |
| malonyl coa-acp transacylase | AO275_12780 | Not Available | Positive | 5029507 - 5030445 | 32612.1 |
| 3-ketoacyl-acp reductase | AO275_12785 | Not Available | Positive | 5030461 - 5031204 | 25758.1 |
| acyl carrier protein | AO275_12790 | Not Available | Positive | 5031397 - 5031633 | 8656.01 |
| 3-oxoacyl-acp synthase | AO275_12795 | Not Available | Positive | 5031746 - 5032990 | 43192.4 |
| 4-amino-4-deoxychorismate lyase | AO275_12800 | Not Available | Positive | 5032990 - 5033805 | 29777.1 |
| aminodeoxychorismate lyase | AO275_12805 | Not Available | Positive | 5033809 - 5034930 | 41098.1 |
| thymidylate kinase | AO275_12810 | Not Available | Positive | 5034950 - 5035582 | 23035.6 |
| dna polymerase iii subunit delta' | AO275_12815 | Not Available | Positive | 5035575 - 5036561 | 36182.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
