Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetraacyldisaccharide 4'-kinase | AO275_12720 | Not Available | Positive | 5017135 - 5018130 | 36568.1 |
| hypothetical protein | AO275_12725 | Not Available | Positive | 5018148 - 5018333 | 6600.16 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | AO275_12730 | Not Available | Positive | 5018330 - 5019094 | 27550.9 |
| udp-n-acetylenolpyruvoylglucosamine reductase | AO275_12735 | Not Available | Positive | 5019129 - 5020148 | 37242.6 |
| ribonuclease e | AO275_12740 | Not Available | Negative | 5020260 - 5023532 | 120290.0 |
| 23s rrna pseudouridylate synthase | AO275_12745 | Not Available | Positive | 5024259 - 5025218 | 35600.8 |
| had family hydrolase | AO275_12750 | Not Available | Positive | 5025205 - 5025864 | 24446.3 |
| peptidase s49 | AO275_12755 | Not Available | Positive | 5025889 - 5026887 | 36265.2 |
| septum formation inhibitor maf | AO275_12760 | Not Available | Negative | 5026941 - 5027519 | 20874.5 |
| metal-binding protein | AO275_12765 | Not Available | Positive | 5027626 - 5028153 | 19301.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
