Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent cmnm(5)s(2)u34 oxidoreductase | AO275_12620 | Not Available | Negative | 4989492 - 4991474 | 72365.3 |
| polyphosphate kinase | AO275_12625 | Not Available | Positive | 4991626 - 4993122 | 58094.1 |
| hemolysin secretion protein d | AO275_12630 | Not Available | Negative | 4993150 - 4994478 | 48600.3 |
| abc transporter | AO275_12635 | Not Available | Negative | 4994491 - 4996641 | 78172.2 |
| channel protein tolc | AO275_12640 | Not Available | Negative | 4996678 - 4998033 | 50361.2 |
| hypothetical protein | AO275_12645 | Not Available | Negative | 4998210 - 4998452 | 9180.27 |
| hypothetical protein | AO275_12650 | Not Available | Positive | 4998451 - 5001723 | 113122.0 |
| hypothetical protein | AO275_12655 | Not Available | Negative | 5001778 - 5002179 | 14941.8 |
| hypothetical protein | AO275_12660 | Not Available | Negative | 5002190 - 5002777 | 21923.7 |
| atp-dependent dna helicase recq | AO275_12665 | Not Available | Positive | 5002953 - 5005082 | 78897.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
