Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_12570 | Not Available | Positive | 4977676 - 4978053 | 13985.6 |
| short-chain dehydrogenase | AO275_12575 | Not Available | Positive | 4978172 - 4978984 | 29595.9 |
| carbon storage regulator | AO275_12580 | Not Available | Positive | 4979158 - 4979355 | 7141.68 |
| hypothetical protein | AO275_12585 | Not Available | Negative | 4979359 - 4979586 | 8764.46 |
| peptidase m42 | AO275_12590 | Not Available | Negative | 4979881 - 4981074 | 42929.7 |
| gnat family acetyltransferase | AO275_12595 | Not Available | Negative | 4981157 - 4982905 | 64981.3 |
| asparagine synthase | AO275_12600 | Not Available | Negative | 4982910 - 4984682 | 65617.5 |
| iron abc transporter permease | AO275_12605 | Not Available | Negative | 4985023 - 4986099 | 39587.1 |
| abc transporter permease | AO275_12610 | Not Available | Negative | 4986089 - 4988557 | 89957.9 |
| abc transporter atp-binding protein | AO275_12615 | Not Available | Negative | 4988559 - 4989227 | 24264.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
