Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| septum formation inhibitor | AO275_12520 | Not Available | Negative | 4966657 - 4967397 | 26461.3 |
| lipid a biosynthesis lauroyl acyltransferase | AO275_12525 | Not Available | Positive | 4967518 - 4968450 | 35907.8 |
| patatin | AO275_12530 | Not Available | Positive | 4968483 - 4969667 | 42181.9 |
| quercetin 2,3-dioxygenase | AO275_12535 | Not Available | Negative | 4969785 - 4970639 | 31738.8 |
| abc transporter | AO275_12540 | Not Available | Negative | 4970856 - 4971668 | 30471.4 |
| serine/threonine protein kinase | AO275_12545 | Not Available | Negative | 4971661 - 4972959 | 48518.9 |
| glycine/betaine abc transporter substrate-binding protein | AO275_12550 | Not Available | Positive | 4974080 - 4974934 | 31031.4 |
| hypothetical protein | AO275_12555 | Not Available | Positive | 4975169 - 4975480 | 11394.0 |
| cation/acetate symporter actp | AO275_12560 | Not Available | Positive | 4975477 - 4977135 | 58772.3 |
| hypothetical protein | AO275_12565 | Not Available | Negative | 4977227 - 4977379 | 5306.11 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
