Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coa-transferase | AO275_12420 | Not Available | Positive | 4946731 - 4947921 | 43135.8 |
| hypothetical protein | AO275_12425 | Not Available | Negative | 4947988 - 4948524 | 19111.5 |
| peptidylprolyl isomerase | AO275_12430 | Not Available | Positive | 4948965 - 4949732 | 26814.2 |
| hypothetical protein | AO275_12435 | Not Available | Positive | 4950097 - 4950549 | 17068.1 |
| cro/cl family transcriptional regulator | AO275_12440 | Not Available | Positive | 4950643 - 4950978 | 11921.2 |
| hypothetical protein | AO275_12445 | Not Available | Positive | 4950975 - 4951358 | 14159.9 |
| diguanylate phosphodiesterase | AO275_12450 | Not Available | Negative | 4951468 - 4953240 | 65799.9 |
| peptidase s41 | AO275_12455 | Not Available | Negative | 4953362 - 4955476 | 78591.9 |
| nad(p)h-quinone oxidoreductase | AO275_12460 | Not Available | Positive | 4955581 - 4956543 | 33744.9 |
| had family hydrolase | AO275_12465 | Not Available | Negative | 4956709 - 4957362 | 24048.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
