Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inaa protein | AO275_17275 | Not Available | Negative | 385309 - 386028 | 27429.5 |
| sam-dependent methyltransferase | AO275_17280 | Not Available | Negative | 386033 - 386713 | 26537.9 |
| histidine kinase | AO275_17285 | Not Available | Negative | 386898 - 388187 | 47975.3 |
| xre family transcriptional regulator | AO275_17290 | Not Available | Negative | 388177 - 388860 | 25533.0 |
| phosphoesterase | AO275_17295 | Not Available | Positive | 389039 - 389770 | 27141.7 |
| molecular chaperone groel | AO275_17300 | Not Available | Negative | 390092 - 391735 | 57141.2 |
| molecular chaperone groes | AO275_17305 | Not Available | Negative | 391785 - 392078 | 10282.4 |
| exclusion suppressor fxsa | AO275_17310 | Not Available | Negative | 392336 - 392830 | 18365.0 |
| heme iron utilization protein | AO275_17315 | Not Available | Negative | 392898 - 393629 | 27225.5 |
| 3-ketoacyl-acp reductase | AO275_17320 | Not Available | Positive | 393767 - 394525 | 26777.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
