Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclic nucleotide-binding protein | AO275_12320 | Not Available | Negative | 4923609 - 4924085 | 17166.8 |
| peptidase s9 | AO275_12325 | Not Available | Negative | 4924168 - 4926228 | 76762.0 |
| mfs transporter | AO275_12330 | Not Available | Positive | 4926362 - 4926844 | 17973.9 |
| glutamine amidotransferase | AO275_12335 | Not Available | Positive | 4926921 - 4927709 | 29196.6 |
| hypothetical protein | AO275_12340 | Not Available | Positive | 4927748 - 4928272 | 19877.0 |
| hypothetical protein | AO275_12345 | Not Available | Negative | 4928439 - 4929161 | 28041.8 |
| hypothetical protein | AO275_12350 | Not Available | Negative | 4929357 - 4930535 | 45611.4 |
| aaa family atpase | AO275_12355 | Not Available | Negative | 4930575 - 4931420 | 32200.9 |
| hypothetical protein | AO275_12360 | Not Available | Negative | 4931582 - 4932652 | 40197.7 |
| cysteine synthase | AO275_12365 | Not Available | Positive | 4932779 - 4933753 | 34597.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
