Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease d | AO275_12270 | Not Available | Positive | 4915344 - 4916477 | 42717.5 |
| hypothetical protein | AO275_12275 | Not Available | Positive | 4916474 - 4916767 | 11320.7 |
| hydroxyacid dehydrogenase | AO275_12280 | Not Available | Positive | 4916839 - 4917771 | 34069.1 |
| nadh dehydrogenase | AO275_12285 | Not Available | Negative | 4917966 - 4918559 | 21894.5 |
| hypothetical protein | AO275_12290 | Not Available | Positive | 4918771 - 4919220 | 17109.1 |
| hypothetical protein | AO275_12295 | Not Available | Negative | 4919225 - 4919620 | 13795.5 |
| 23s rrna methyltransferase | AO275_12300 | Not Available | Negative | 4919685 - 4920185 | 18322.9 |
| copper resistance protein copb | AO275_12305 | Not Available | Negative | 4920235 - 4921131 | 32404.9 |
| copper oxidase | AO275_12310 | Not Available | Negative | 4921128 - 4922891 | 65855.4 |
| restriction endonuclease | AO275_12315 | Not Available | Negative | 4923168 - 4923542 | 14185.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
