Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylose transporter | AO275_12220 | Not Available | Negative | 4902191 - 4903747 | 56508.8 |
| sugar abc transporter substrate-binding protein | AO275_12225 | Not Available | Negative | 4903846 - 4904847 | 36042.3 |
| xylose isomerase | AO275_12230 | Not Available | Negative | 4905015 - 4906331 | 49361.1 |
| arac family transcriptional regulator | AO275_12235 | Not Available | Positive | 4906497 - 4907690 | 43663.5 |
| gluconate transporter | AO275_12240 | Not Available | Negative | 4907778 - 4909148 | 47263.0 |
| gas vesicle protein | AO275_12245 | Not Available | Positive | 4909479 - 4909949 | 17175.2 |
| hypothetical protein | AO275_12250 | Not Available | Negative | 4910019 - 4910558 | 19980.8 |
| glycerol-3-phosphatase | AO275_12255 | Not Available | Negative | 4910689 - 4911336 | 22752.3 |
| malate dehydrogenase | AO275_12260 | Not Available | Positive | 4911632 - 4913323 | 62141.9 |
| hypothetical protein | AO275_12265 | Not Available | Positive | 4913561 - 4915201 | 61105.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
