Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroperoxidase | AO275_12120 | Not Available | Negative | 4882872 - 4885142 | 82495.4 |
| hypothetical protein | AO275_12125 | Not Available | Negative | 4885433 - 4886338 | 33486.2 |
| peptidase m20 | AO275_12130 | Not Available | Negative | 4886698 - 4887987 | 46168.9 |
| lipase | AO275_12135 | Not Available | Positive | 4888282 - 4889484 | 42554.7 |
| quinolinate synthase a | AO275_12140 | Not Available | Positive | 4889738 - 4890796 | 38809.7 |
| peptidase m48 | AO275_12145 | Not Available | Negative | 4890873 - 4892306 | 53283.8 |
| response regulator sira | AO275_12150 | Not Available | Positive | 4892447 - 4892698 | 9110.95 |
| permease | AO275_12155 | Not Available | Positive | 4892730 - 4893800 | 39462.1 |
| peroxiredoxin | AO275_12160 | Not Available | Negative | 4893852 - 4894325 | 17376.7 |
| glycine cleavage system protein r | AO275_12165 | Not Available | Negative | 4894335 - 4894898 | 20569.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
