Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp_04281 | AO275_11920 | Not Available | Negative | 4841901 - 4842608 | Not Available |
| hypothetical protein | AO275_11925 | Not Available | Negative | 4842619 - 4843080 | 17497.3 |
| rna-binding protein | AO275_11930 | Not Available | Negative | 4843150 - 4843860 | 26431.1 |
| acetyltransferase | AO275_11935 | Not Available | Negative | 4843952 - 4844395 | 16970.3 |
| ribosomal protein s12 methylthiotransferase rimo | AO275_11940 | Not Available | Negative | 4844502 - 4845845 | 49761.9 |
| hypothetical protein | AO275_11945 | Not Available | Positive | 4845844 - 4846059 | 7781.61 |
| potassium transporter kup | AO275_11950 | Not Available | Positive | 4846106 - 4848001 | 68563.5 |
| virulence factor family protein | AO275_11955 | Not Available | Negative | 4848082 - 4849413 | 47826.3 |
| hypothetical protein | AO275_11960 | Not Available | Negative | 4849413 - 4852055 | 96343.6 |
| Trna-met | Not Available | Not Available | Positive | 4852407 - 4852483 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
