Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| damage-inducible protein cina | AO275_11870 | Not Available | Positive | 4833729 - 4834229 | 17458.7 |
| recombinase reca | AO275_11875 | Not Available | Positive | 4834323 - 4835387 | 37696.5 |
| recombinase recx | AO275_11880 | Not Available | Positive | 4835393 - 4835860 | 17893.4 |
| cytochrome d ubiquinol oxidase subunit ii | AO275_11885 | Not Available | Negative | 4835863 - 4836981 | 41982.3 |
| hypothetical protein | AO275_11890 | Not Available | Negative | 4837329 - 4837745 | 15309.5 |
| hypothetical protein | AO275_11895 | Not Available | Positive | 4837964 - 4838677 | 27220.6 |
| luxr family transcriptional regulator | AO275_11900 | Not Available | Positive | 4838915 - 4839562 | 23398.2 |
| diacylglycerol kinase | AO275_11905 | Not Available | Positive | 4839644 - 4840009 | 12790.1 |
| lysr family transcriptional regulator | AO275_11910 | Not Available | Negative | 4840024 - 4840950 | 34382.2 |
| ferredoxin-nadp reductase | AO275_11915 | Not Available | Positive | 4841074 - 4841853 | 29668.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
