Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease hii | AO275_11770 | Not Available | Positive | 4808963 - 4809613 | 23201.4 |
| dna polymerase iii subunit alpha | AO275_11775 | Not Available | Positive | 4809677 - 4813198 | 131140.0 |
| acetyl-coa carboxylase subunit alpha | AO275_11780 | Not Available | Positive | 4813328 - 4814275 | 35050.2 |
| trna(ile)-lysidine synthetase | AO275_11785 | Not Available | Positive | 4814600 - 4815937 | 49561.3 |
| ctp synthase | AO275_11790 | Not Available | Positive | 4816202 - 4817833 | 59795.5 |
| 2-dehydro-3-deoxyphosphooctonate aldolase | AO275_11795 | Not Available | Positive | 4817849 - 4818694 | 31011.8 |
| enolase | AO275_11800 | Not Available | Positive | 4818833 - 4820119 | 45384.8 |
| cell division protein ftsb | AO275_11805 | Not Available | Positive | 4820308 - 4820586 | 10498.8 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | AO275_11810 | Not Available | Positive | 4820601 - 4821311 | 25961.0 |
| lysr family transcriptional regulator | AO275_11815 | Not Available | Negative | 4821324 - 4822220 | 33991.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
