Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsc family transcriptional regulator | AO275_11670 | Not Available | Negative | 4787994 - 4788341 | 13215.8 |
| hypothetical protein | AO275_11675 | Not Available | Positive | 4788555 - 4788785 | 9050.83 |
| zinc-dependent metalloprotease | AO275_11680 | Not Available | Negative | 4788860 - 4789687 | 31240.8 |
| succinyldiaminopimelate transaminase | AO275_11685 | Not Available | Negative | 4789821 - 4791014 | 43893.5 |
| protein-pii uridylyltransferase | AO275_11690 | Not Available | Negative | 4791047 - 4793746 | 102823.0 |
| methionine aminopeptidase | AO275_11695 | Not Available | Negative | 4793794 - 4794576 | 28773.7 |
| 30s ribosomal protein s2 | AO275_11700 | Not Available | Positive | 4794889 - 4795632 | 27222.1 |
| elongation factor ts | AO275_11705 | Not Available | Positive | 4795823 - 4796692 | 30869.1 |
| uridylate kinase | AO275_11710 | Not Available | Positive | 4796900 - 4797643 | 26600.5 |
| ribosome-recycling factor | AO275_11715 | Not Available | Positive | 4797640 - 4798197 | 20093.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
