Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_11615 | Not Available | Negative | 4775040 - 4775729 | 23839.9 |
| glycerol-3-phosphate o-acyltransferase | AO275_11625 | Not Available | Negative | 4776175 - 4778676 | 94808.2 |
| hypothetical protein | AO275_11630 | Not Available | Negative | 4779197 - 4779574 | 14141.3 |
| sam-dependent methyltransferase | AO275_11635 | Not Available | Negative | 4779595 - 4780404 | 30136.1 |
| succinyl-diaminopimelate desuccinylase | AO275_11640 | Not Available | Negative | 4780404 - 4781555 | 41064.7 |
| beta-(1-3)-glucosyl transferase | AO275_11645 | Not Available | Negative | 4781656 - 4784169 | 94545.1 |
| thiamine biosynthesis protein thif | AO275_11650 | Not Available | Positive | 4784423 - 4785253 | 29693.8 |
| fe-s metabolism protein sufe | AO275_11655 | Not Available | Negative | 4785244 - 4785651 | 15035.9 |
| cysteine sulfinate desulfinase | AO275_11660 | Not Available | Negative | 4785648 - 4786853 | 43282.8 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | AO275_11665 | Not Available | Negative | 4786913 - 4787947 | 36206.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
