Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | AO275_11515 | Not Available | Positive | 4755131 - 4755856 | 27282.2 |
| hypothetical protein | AO275_11520 | Not Available | Positive | 4755882 - 4756427 | 20146.9 |
| hypothetical protein | AO275_11525 | Not Available | Positive | 4756461 - 4757738 | 47805.4 |
| alpha/beta hydrolase | AO275_11530 | Not Available | Positive | 4757845 - 4758747 | 33171.0 |
| hypothetical protein | AO275_11535 | Not Available | Positive | 4758744 - 4759070 | 11758.2 |
| hypothetical protein | AO275_11540 | Not Available | Negative | 4759134 - 4759916 | 28354.6 |
| chromosome partitioning protein para | AO275_11545 | Not Available | Negative | 4759977 - 4760390 | 14675.4 |
| pilin assembly protein | AO275_11550 | Not Available | Negative | 4760645 - 4761004 | 13371.8 |
| phosphoenolpyruvate carboxylase | AO275_11555 | Not Available | Positive | 4761254 - 4763890 | 97723.4 |
| adenylate kinase | AO275_11560 | Not Available | Positive | 4764172 - 4764819 | 23217.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
