Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_11465 | Not Available | Positive | 4742507 - 4743262 | 26435.5 |
| chemotaxis protein | AO275_11470 | Not Available | Positive | 4743617 - 4745239 | 58789.5 |
| chemotaxis protein chew | AO275_11475 | Not Available | Positive | 4745249 - 4745785 | 20055.3 |
| chemotaxis protein cher | AO275_11480 | Not Available | Positive | 4745782 - 4747062 | 46444.6 |
| chemotaxis protein chew | AO275_11485 | Not Available | Positive | 4747062 - 4747751 | 25143.9 |
| chemotaxis protein chea | AO275_11490 | Not Available | Positive | 4747748 - 4750111 | 86163.3 |
| chemotaxis protein chey | AO275_11495 | Not Available | Positive | 4750108 - 4751118 | 35848.9 |
| diguanylate cyclase | AO275_11500 | Not Available | Positive | 4751164 - 4752168 | 37005.3 |
| peptide chain release factor 2 | AO275_11505 | Not Available | Positive | 4752545 - 4753426 | 32743.3 |
| lysine--trna ligase | AO275_11510 | Not Available | Positive | 4753550 - 4755052 | 56980.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
