Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylformylglycinamidine synthase | AO275_11315 | Not Available | Positive | 4707590 - 4711486 | 140982.0 |
| ngg1p interacting factor nif3 | AO275_11320 | Not Available | Positive | 4711503 - 4711814 | 11508.7 |
| hypothetical protein | AO275_11325 | Not Available | Negative | 4711916 - 4712479 | 21430.9 |
| adp-ribose pyrophosphatase | AO275_11330 | Not Available | Negative | 4712530 - 4713081 | 20980.2 |
| dna mismatch repair protein mutt | AO275_11335 | Not Available | Positive | 4713232 - 4713828 | 22310.6 |
| hypothetical protein | AO275_11340 | Not Available | Positive | 4713887 - 4714411 | 18636.6 |
| fe-s protein | AO275_11345 | Not Available | Positive | 4714411 - 4714629 | 7967.55 |
| preq0 transporter | AO275_11350 | Not Available | Positive | 4714728 - 4715195 | 16985.2 |
| phosphoribosylglycinamide formyltransferase | AO275_11355 | Not Available | Positive | 4715299 - 4716480 | 42243.6 |
| mfs transporter | AO275_11360 | Not Available | Negative | 4716533 - 4717852 | 46424.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
