Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gmp synthase | AO275_11260 | Not Available | Positive | 4694908 - 4696485 | 58154.8 |
| hypothetical protein | AO275_11265 | Not Available | Negative | 4696552 - 4697562 | 38083.3 |
| hypothetical protein | AO275_11270 | Not Available | Negative | 4697660 - 4698754 | 41712.5 |
| hypothetical protein | AO275_11275 | Not Available | Negative | 4698758 - 4700419 | 61269.7 |
| tetr family transcriptional regulator | AO275_11280 | Not Available | Negative | 4701303 - 4701947 | 23465.0 |
| pyridine nucleotide-disulfide oxidoreductase | AO275_11285 | Not Available | Positive | 4702054 - 4702947 | 32016.2 |
| hypothetical protein | AO275_11295 | Not Available | Positive | 4703573 - 4703848 | 10077.1 |
| copper oxidase | AO275_11300 | Not Available | Positive | 4704013 - 4705386 | 50663.5 |
| zinc-binding protein | AO275_11305 | Not Available | Positive | 4705386 - 4705889 | 17984.8 |
| murein transglycosylase | AO275_11310 | Not Available | Negative | 4705886 - 4707310 | 53322.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
