Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fes assembly protein iscx | AO275_11160 | Not Available | Positive | 4673890 - 4674090 | 7512.15 |
| nucleoside diphosphate kinase | AO275_11165 | Not Available | Positive | 4674186 - 4674611 | 14951.7 |
| 23s rrna (adenine(2503)-c2)-methyltransferase | AO275_11170 | Not Available | Positive | 4674643 - 4675791 | 42313.2 |
| pilus assembly protein pilw | AO275_11175 | Not Available | Positive | 4675830 - 4676588 | 28589.9 |
| cro/cl family transcriptional regulator | AO275_11180 | Not Available | Positive | 4676588 - 4677589 | 35078.5 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | AO275_11185 | Not Available | Positive | 4677593 - 4678702 | 39765.1 |
| histidinol dehydrogenase | AO275_11190 | Not Available | Positive | 4678725 - 4680014 | 48004.8 |
| gtp-binding protein | AO275_11195 | Not Available | Positive | 4680054 - 4680695 | 22839.9 |
| outer membrane protein assembly factor bamb | AO275_11200 | Not Available | Positive | 4680688 - 4681839 | 40819.7 |
| ribosome-associated gtpase enga | AO275_11205 | Not Available | Positive | 4681980 - 4683449 | 54896.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
