Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase | AO275_05235 | Not Available | Negative | 4616321 - 4617700 | 50884.1 |
| hypothetical protein | AO275_05240 | Not Available | Negative | 4617757 - 4618200 | 16030.4 |
| copper-binding protein | AO275_05245 | Not Available | Negative | 4618215 - 4618676 | 16895.7 |
| hypothetical protein | AO275_05250 | Not Available | Negative | 4618731 - 4619120 | 13854.9 |
| hypothetical protein | AO275_05255 | Not Available | Negative | 4619293 - 4619499 | 7961.81 |
| dna polymerase iii subunit delta | AO275_05260 | Not Available | Negative | 4619504 - 4620541 | 37420.3 |
| hypothetical protein | AO275_05265 | Not Available | Negative | 4620584 - 4621189 | 22200.4 |
| leucine--trna ligase | AO275_05270 | Not Available | Negative | 4621276 - 4623882 | 97023.6 |
| hypothetical protein | AO275_05275 | Not Available | Positive | 4624194 - 4624544 | 12711.4 |
| hypothetical protein | AO275_05280 | Not Available | Positive | 4624647 - 4625408 | 27753.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
