Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase | AO275_05185 | Not Available | Negative | 4599965 - 4600498 | 19467.4 |
| acetyltransferase | AO275_05190 | Not Available | Negative | 4600512 - 4601054 | 19736.5 |
| urease subunit gamma | AO275_05195 | Not Available | Negative | 4601064 - 4601366 | 11038.5 |
| urease accessory protein ured | AO275_05200 | Not Available | Negative | 4601457 - 4602302 | 31053.2 |
| abc transporter atp-binding protein | AO275_05205 | Not Available | Negative | 4602351 - 4603049 | 25581.4 |
| abc transporter atp-binding protein | AO275_05210 | Not Available | Negative | 4603139 - 4603999 | 31028.2 |
| urea abc transporter permease subunit urtc | AO275_05215 | Not Available | Negative | 4603996 - 4605075 | 38804.6 |
| urea abc transporter permease | AO275_05220 | Not Available | Negative | 4605075 - 4606664 | 56254.7 |
| branched-chain amino acid abc transporter substrate-binding protein | AO275_05225 | Not Available | Negative | 4606825 - 4608090 | 46215.2 |
| hypothetical protein | AO275_05230 | Not Available | Positive | 4608589 - 4616049 | 274523.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
