Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_05135 | Not Available | Positive | 4590009 - 4590236 | 8085.45 |
| hypothetical protein | AO275_05140 | Not Available | Negative | 4590233 - 4591114 | 31755.5 |
| phosphate starvation-inducible protein psif | AO275_05145 | Not Available | Positive | 4591267 - 4591557 | 10194.5 |
| hypothetical protein | AO275_05150 | Not Available | Positive | 4591745 - 4592755 | 36723.7 |
| heat-shock protein | AO275_05155 | Not Available | Negative | 4592780 - 4594045 | 46426.4 |
| dna-binding protein | AO275_05160 | Not Available | Positive | 4594355 - 4595296 | 34509.9 |
| histidine kinase | AO275_05165 | Not Available | Negative | 4595543 - 4596673 | 41176.0 |
| hypothetical protein | AO275_05170 | Not Available | Positive | 4596833 - 4597459 | 23155.0 |
| urease subunit alpha | AO275_05175 | Not Available | Negative | 4597805 - 4599505 | 60741.8 |
| urease subunit beta | AO275_05180 | Not Available | Negative | 4599660 - 4599968 | 11175.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
