Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acylglucosamine 2-epimerase | AO275_05085 | Not Available | Negative | 4580205 - 4581419 | 45063.4 |
| protein hupe | AO275_05090 | Not Available | Negative | 4581657 - 4582229 | 18884.6 |
| urease accessory protein ureg | AO275_05095 | Not Available | Negative | 4582252 - 4582869 | 22040.5 |
| urease accessory protein uref | AO275_05100 | Not Available | Negative | 4582891 - 4583565 | 25164.0 |
| urease accessory protein uree | AO275_05105 | Not Available | Negative | 4583562 - 4584062 | 18861.3 |
| tetr family transcriptional regulator | AO275_05110 | Not Available | Negative | 4584301 - 4584933 | 23407.6 |
| hypothetical protein | AO275_05115 | Not Available | Positive | 4585404 - 4587470 | 74213.5 |
| bacterioferritin | AO275_05120 | Not Available | Negative | 4587635 - 4588168 | 19974.3 |
| transcriptional regulator | AO275_05125 | Not Available | Negative | 4588531 - 4588869 | 12443.8 |
| alpha/beta hydrolase | AO275_05130 | Not Available | Positive | 4589059 - 4589949 | 32037.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
