Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| azurin | AO275_05035 | Not Available | Positive | 4569408 - 4569854 | 16021.3 |
| nad synthetase | AO275_05040 | Not Available | Negative | 4569999 - 4570826 | 29963.7 |
| nicotinate phosphoribosyltransferase | AO275_05045 | Not Available | Negative | 4570853 - 4572076 | 46753.8 |
| lysr family transcriptional regulator | AO275_05050 | Not Available | Negative | 4572176 - 4573081 | 34438.3 |
| amino acid abc transporter substrate-binding protein | AO275_05055 | Not Available | Positive | 4573572 - 4574708 | 40242.9 |
| branched-chain amino acid transporter permease subunit livh | AO275_05060 | Not Available | Positive | 4574881 - 4575795 | 32630.1 |
| branched-chain amino acid abc transporter permease | AO275_05065 | Not Available | Positive | 4575798 - 4577099 | 46718.8 |
| abc transporter atp-binding protein | AO275_05070 | Not Available | Positive | 4577096 - 4577971 | 32313.3 |
| abc transporter atp-binding protein | AO275_05075 | Not Available | Positive | 4577968 - 4578684 | 26171.0 |
| hypothetical protein | AO275_05080 | Not Available | Positive | 4579440 - 4580204 | 27352.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
