Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtpase hflx | AO275_04935 | Not Available | Positive | 4540075 - 4541376 | 48784.4 |
| hypothetical protein | AO275_04940 | Not Available | Positive | 4541473 - 4542651 | 43368.8 |
| membrane protease hflc | AO275_04945 | Not Available | Positive | 4542651 - 4543520 | 33020.4 |
| atp phosphoribosyltransferase regulatory subunit | AO275_04950 | Not Available | Positive | 4543804 - 4544991 | 42800.2 |
| adenylosuccinate synthetase | AO275_04955 | Not Available | Positive | 4545046 - 4546338 | 47051.5 |
| chemotaxis protein | AO275_04960 | Not Available | Positive | 4546532 - 4548466 | 68125.2 |
| hypothetical protein | AO275_04965 | Not Available | Positive | 4548839 - 4551538 | 98880.9 |
| Trna-leu | Not Available | Not Available | Positive | 4551634 - 4551720 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 4551882 - 4551968 | Not Available |
| exoribonuclease r | AO275_04980 | Not Available | Positive | 4552193 - 4554826 | 97800.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
