Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase iv | AO275_04835 | Not Available | Positive | 4515899 - 4518154 | 82971.8 |
| hypothetical protein | AO275_04840 | Not Available | Positive | 4518338 - 4519033 | 25275.6 |
| histidine kinase | AO275_04845 | Not Available | Negative | 4519224 - 4520780 | 57132.7 |
| phosphoserine phosphatase | AO275_04850 | Not Available | Positive | 4520911 - 4522125 | 43815.9 |
| molecular chaperone | AO275_04855 | Not Available | Negative | 4522168 - 4523952 | 66709.9 |
| phosphatidylserine decarboxylase | AO275_04860 | Not Available | Negative | 4524136 - 4525008 | 31926.8 |
| thiosulfate sulfurtransferase | AO275_04865 | Not Available | Negative | 4525069 - 4525884 | 29702.1 |
| histidine kinase | AO275_04870 | Not Available | Negative | 4525930 - 4527465 | 57189.6 |
| flagellar motor stator protein mota | AO275_04875 | Not Available | Positive | 4527673 - 4528524 | 30427.6 |
| flagellar motor protein motb | AO275_04880 | Not Available | Positive | 4528528 - 4529559 | 36990.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
