Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_04785 | Not Available | Positive | 4507411 - 4508787 | 50221.3 |
| hypothetical protein | AO275_04790 | Not Available | Positive | 4508787 - 4509206 | 16137.3 |
| hypothetical protein | AO275_04795 | Not Available | Positive | 4509199 - 4509648 | 16857.6 |
| hypothetical protein | AO275_04800 | Not Available | Positive | 4509675 - 4509878 | 7581.17 |
| hypothetical protein | AO275_04805 | Not Available | Positive | 4509944 - 4510381 | 16608.7 |
| serine/threonine protein phosphatase | AO275_04810 | Not Available | Positive | 4510938 - 4511714 | 28413.7 |
| esterase | AO275_04815 | Not Available | Positive | 4511803 - 4512420 | 22400.9 |
| dna topoisomerase iv | AO275_04820 | Not Available | Positive | 4512492 - 4514396 | 69507.0 |
| dna topoisomerase iv | AO275_04825 | Not Available | Positive | 4514393 - 4515370 | 35825.7 |
| aspartyl protease | AO275_04830 | Not Available | Positive | 4515367 - 4515888 | 18557.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
