Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail constituent protein | AO275_20550 | Not Available | Negative | 2195288 - 2195944 | 22705.5 |
| Hypothetical protein | AO275_20555 | Not Available | Negative | 2196016 - 2196426 | 14543.1 |
| Putative tail protein | AO275_20560 | Not Available | Negative | 2196423 - 2197079 | 23566.9 |
| Tail attachment protein | AO275_20565 | Not Available | Negative | 2197076 - 2197444 | 13293.1 |
| Virion structural protein | AO275_20570 | Not Available | Negative | 2197700 - 2198200 | 18277.7 |
| ctp synthase | AO275_20575 | Not Available | Negative | 2198204 - 2198653 | 16554.4 |
| Major capsid protein | AO275_20580 | Not Available | Negative | 2198678 - 2199631 | 34099.2 |
| Hypothetical protein | AO275_20585 | Not Available | Negative | 2199644 - 2200372 | 26012.6 |
| hypothetical protein | AO275_20590 | Not Available | Negative | 2200460 - 2200696 | 8653.32 |
| Head morphogenesis protein | AO275_20595 | Not Available | Negative | 2200778 - 2201863 | 39961.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
