Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | AO275_04735 | Not Available | Negative | 4496021 - 4496836 | 28922.8 |
| fad-dependent oxidoreductase | AO275_04740 | Not Available | Negative | 4496833 - 4498008 | 41947.8 |
| multidrug dmt transporter | AO275_04745 | Not Available | Negative | 4498057 - 4498389 | 11678.1 |
| 3-deoxy-d-manno-octulosonic acid transferase | AO275_04750 | Not Available | Positive | 4498527 - 4499810 | 46838.2 |
| channel protein tolc | AO275_04755 | Not Available | Negative | 4499998 - 4501437 | 52889.5 |
| thiamine biosynthesis protein thic | AO275_04760 | Not Available | Positive | 4501859 - 4503748 | 69660.0 |
| nitrate reductase | AO275_04765 | Not Available | Positive | 4503884 - 4505173 | 45230.5 |
| hypothetical protein | AO275_04770 | Not Available | Negative | 4505142 - 4505888 | 27415.1 |
| adp-ribose pyrophosphatase | AO275_04775 | Not Available | Positive | 4506098 - 4506715 | 22953.1 |
| cytoplasmic protein | AO275_04780 | Not Available | Positive | 4506706 - 4507158 | 17270.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
