Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase | AO275_04685 | Not Available | Positive | 4484400 - 4485530 | 41831.6 |
| acetyltransferase | AO275_04690 | Not Available | Positive | 4485530 - 4486426 | 33658.1 |
| glcnac-pi de-n-acetylase | AO275_04695 | Not Available | Positive | 4486423 - 4487832 | 52822.8 |
| glycosyltransferase | AO275_04700 | Not Available | Positive | 4487863 - 4488819 | 36939.4 |
| hypothetical protein | AO275_04705 | Not Available | Positive | 4488851 - 4489624 | 29834.6 |
| hypothetical protein | AO275_04710 | Not Available | Positive | 4489614 - 4490777 | 43561.4 |
| toluene tolerance protein | AO275_04715 | Not Available | Negative | 4490820 - 4491458 | 24093.4 |
| lipid transporter atp-binding/permease | AO275_04720 | Not Available | Positive | 4491575 - 4493377 | 65940.5 |
| heptose 1-phosphate adenyltransferase | AO275_04725 | Not Available | Positive | 4493562 - 4494983 | 49982.2 |
| metal abc transporter atpase | AO275_04730 | Not Available | Negative | 4495022 - 4495984 | 36588.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
