Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase | AO275_04635 | Not Available | Positive | 4466164 - 4469121 | 110881.0 |
| adp-heptose--lps heptosyltransferase | AO275_04640 | Not Available | Positive | 4469250 - 4470284 | 38098.1 |
| adp-heptose--lps heptosyltransferase | AO275_04645 | Not Available | Positive | 4470287 - 4471351 | 39510.4 |
| glucosyltransferase i rfag | AO275_04650 | Not Available | Positive | 4471351 - 4472472 | 42145.8 |
| heptose kinase | AO275_04655 | Not Available | Positive | 4472472 - 4473278 | 30682.1 |
| heptose kinase | AO275_04660 | Not Available | Positive | 4473278 - 4474012 | 28617.3 |
| lipopolysaccharide kinase | AO275_04665 | Not Available | Positive | 4474009 - 4474788 | 29657.3 |
| serine/threonine protein kinase | AO275_04670 | Not Available | Positive | 4474788 - 4476233 | 53990.0 |
| type iii effector | AO275_04675 | Not Available | Negative | 4476261 - 4482338 | 224950.0 |
| carbamoyltransferase | AO275_04680 | Not Available | Positive | 4482659 - 4484416 | 65538.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
