Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein | AO275_04585 | Not Available | Negative | 4452584 - 4454209 | 58553.0 |
| hypothetical protein | AO275_04590 | Not Available | Positive | 4454629 - 4454862 | 8364.72 |
| zapa | AO275_04595 | Not Available | Positive | 4454859 - 4455161 | 10874.1 |
| hypothetical protein | AO275_04600 | Not Available | Negative | 4455334 - 4455594 | 9242.18 |
| hypothetical protein | AO275_04605 | Not Available | Negative | 4455700 - 4455930 | 8339.09 |
| lactate dehydrogenase | AO275_04610 | Not Available | Positive | 4456313 - 4457149 | 31774.4 |
| peptide methionine sulfoxide reductase | AO275_04615 | Not Available | Negative | 4457248 - 4457895 | 23409.7 |
| diguanylate cyclase | AO275_04620 | Not Available | Negative | 4458043 - 4460736 | 100846.0 |
| dihydrolipoamide acetyltransferase | AO275_04625 | Not Available | Negative | 4461350 - 4462993 | 56428.3 |
| pyruvate dehydrogenase | AO275_04630 | Not Available | Negative | 4463136 - 4465781 | 99445.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
