Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | AO275_04485 | Not Available | Positive | 4427034 - 4429163 | 78905.8 |
| metal-dependent hydrolase | AO275_04490 | Not Available | Positive | 4429205 - 4429726 | 19992.1 |
| hypothetical protein | AO275_04495 | Not Available | Positive | 4429750 - 4430046 | 11229.4 |
| acyltransferase | AO275_04500 | Not Available | Negative | 4430149 - 4430607 | 17447.9 |
| fad-binding monooxygenase | AO275_04505 | Not Available | Negative | 4430732 - 4431928 | 44063.7 |
| transcriptional regulator | AO275_04510 | Not Available | Negative | 4432003 - 4432446 | 15986.3 |
| amino acid abc transporter substrate-binding protein | AO275_04515 | Not Available | Positive | 4432768 - 4433523 | 28061.8 |
| hypothetical protein | AO275_04520 | Not Available | Negative | 4433486 - 4435684 | 81453.3 |
| hypothetical protein | AO275_04525 | Not Available | Negative | 4435799 - 4436977 | 42728.3 |
| atp-dependent rna helicase | AO275_04530 | Not Available | Negative | 4437097 - 4438476 | 49939.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
