Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein | AO275_04430 | Not Available | Positive | 4403900 - 4404388 | 17586.2 |
| hypothetical protein | AO275_04435 | Not Available | Negative | 4404436 - 4405899 | 55448.7 |
| potassium transporter kefa | AO275_04440 | Not Available | Negative | 4405948 - 4409334 | 125747.0 |
| potassium:proton antiporter | AO275_04445 | Not Available | Negative | 4409373 - 4411115 | 61425.0 |
| hypothetical protein | AO275_04455 | Not Available | Positive | 4414048 - 4416582 | 93159.1 |
| acyl-coa dehydrogenase | AO275_04460 | Not Available | Negative | 4416712 - 4418514 | 66173.9 |
| hypothetical protein | AO275_04465 | Not Available | Negative | 4418700 - 4419830 | 40424.3 |
| transcriptional regulator | AO275_04470 | Not Available | Negative | 4420073 - 4424026 | 142911.0 |
| proline:sodium symporter putp | AO275_04475 | Not Available | Positive | 4424475 - 4425962 | 52816.2 |
| alginate lyase | AO275_04480 | Not Available | Negative | 4426045 - 4426716 | 25317.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
