Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil phosphoribosyltransferase | AO275_04380 | Not Available | Negative | 4390277 - 4390789 | 18544.5 |
| holliday junction resolvase | AO275_04385 | Not Available | Negative | 4390887 - 4391327 | 15981.2 |
| hypothetical protein | AO275_04390 | Not Available | Negative | 4391327 - 4391899 | 20462.3 |
| energy transducer tonb | AO275_04395 | Not Available | Negative | 4391977 - 4392879 | 33199.7 |
| glutathione synthetase | AO275_04400 | Not Available | Negative | 4393185 - 4394144 | 35244.7 |
| pilus assembly protein pilg | AO275_04405 | Not Available | Positive | 4394378 - 4394788 | 15080.4 |
| chemotaxis protein chey | AO275_04410 | Not Available | Positive | 4394838 - 4395203 | 13313.2 |
| protein pili | AO275_04415 | Not Available | Positive | 4395218 - 4395757 | 20203.6 |
| chemotaxis protein | AO275_04420 | Not Available | Positive | 4395836 - 4397878 | 73246.6 |
| histidine kinase | AO275_04425 | Not Available | Positive | 4397926 - 4403907 | 220182.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
