Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine biosynthesis protein metw | AO275_04330 | Not Available | Negative | 4381346 - 4381966 | 23576.1 |
| homoserine o-acetyltransferase | AO275_04335 | Not Available | Negative | 4381974 - 4383113 | 41700.4 |
| hypothetical protein | AO275_04340 | Not Available | Negative | 4383282 - 4383872 | 21544.8 |
| pyrroline-5-carboxylate reductase | AO275_04345 | Not Available | Negative | 4383899 - 4384717 | 28072.0 |
| hypothetical protein | AO275_04350 | Not Available | Negative | 4384742 - 4385428 | 24398.2 |
| twitching motility protein pilt | AO275_04355 | Not Available | Positive | 4385484 - 4386518 | 37871.0 |
| glycoside hydrolase | AO275_04360 | Not Available | Negative | 4386572 - 4387255 | 25143.3 |
| hypothetical protein | AO275_04365 | Not Available | Positive | 4387506 - 4387910 | 15424.0 |
| dihydroorotase | AO275_04370 | Not Available | Negative | 4387992 - 4389263 | 44085.9 |
| aspartate carbamoyltransferase catalytic subunit | AO275_04375 | Not Available | Negative | 4389260 - 4390264 | 36399.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
