Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | AO275_04180 | Not Available | Positive | 4354265 - 4355131 | 32026.1 |
| 5-hydroxymethyluracil dna glycosylase | AO275_04185 | Not Available | Positive | 4355178 - 4355990 | 30365.0 |
| multidrug transporter | AO275_04190 | Not Available | Positive | 4356092 - 4356430 | 11273.0 |
| ferredoxin | AO275_04195 | Not Available | Negative | 4356441 - 4356695 | 9505.25 |
| phosphopantetheine adenylyltransferase | AO275_04200 | Not Available | Negative | 4356797 - 4357276 | 17799.5 |
| coniferyl aldehyde dehydrogenase | AO275_04205 | Not Available | Negative | 4357434 - 4358861 | 53242.5 |
| tetr family transcriptional regulator | AO275_04210 | Not Available | Positive | 4359026 - 4359688 | 25616.9 |
| 3-mercaptopyruvate sulfurtransferase | AO275_04215 | Not Available | Positive | 4359739 - 4360596 | 30889.7 |
| alpha/beta hydrolase | AO275_04220 | Not Available | Negative | 4360604 - 4361638 | 38343.5 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | AO275_04225 | Not Available | Negative | 4361923 - 4362507 | 21120.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
