Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | AO275_04075 | Not Available | Negative | 4328651 - 4329265 | 23323.6 |
| poly(r)-hydroxyalkanoic acid synthase | AO275_04080 | Not Available | Negative | 4329347 - 4331032 | 63057.0 |
| poly(3-hydroxyalkanoate) depolymerase | AO275_04085 | Not Available | Negative | 4331199 - 4332056 | 31666.8 |
| poly(r)-hydroxyalkanoic acid synthase | AO275_04090 | Not Available | Negative | 4332188 - 4333867 | 62545.6 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | AO275_04095 | Not Available | Negative | 4334237 - 4334614 | 14119.9 |
| atp-dependent protease atp-binding subunit hslu | AO275_04100 | Not Available | Negative | 4334717 - 4336054 | 49776.0 |
| atp-dependent protease subunit hslv | AO275_04105 | Not Available | Negative | 4336096 - 4336626 | 18827.6 |
| arginine--trna ligase | AO275_04115 | Not Available | Negative | 4337632 - 4339368 | 63698.1 |
| primosomal protein n' | AO275_04120 | Not Available | Negative | 4339586 - 4341805 | 81993.1 |
| 50s ribosomal protein l31 | AO275_04125 | Not Available | Positive | 4341971 - 4342192 | 7894.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
