Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase | AO275_04025 | Not Available | Negative | 4322078 - 4322533 | 16407.7 |
| preprotein translocase subunit seca | AO275_04030 | Not Available | Negative | 4322538 - 4322843 | 11226.4 |
| phosphoribosyl-atp pyrophosphatase | AO275_04035 | Not Available | Negative | 4322891 - 4323223 | 11909.0 |
| phosphoribosyl-amp cyclohydrolase | AO275_04040 | Not Available | Negative | 4323226 - 4323618 | 14945.7 |
| ubiquinone biosynthesis protein ubib | AO275_04045 | Not Available | Negative | 4323686 - 4325305 | 62092.9 |
| sterol-binding protein | AO275_04050 | Not Available | Negative | 4325302 - 4325925 | 22905.4 |
| ubiquinone biosynthesis methyltransferase ubie | AO275_04055 | Not Available | Negative | 4325925 - 4326695 | 28454.4 |
| polyhydroxyalkanoic acid system protein | AO275_04060 | Not Available | Positive | 4326840 - 4327118 | 10230.3 |
| poly(3-hydroxyalkanoate) granule-associated protein phai | AO275_04065 | Not Available | Positive | 4327278 - 4327751 | 17499.8 |
| poly(hydroxyalkanoate) granule-associated protein | AO275_04070 | Not Available | Positive | 4327762 - 4328547 | 27083.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
